STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59714.1Putative protein {ECO:0000313|EMBL:EGM98506,1}; tr|F7M8M7|F7M8M7_9BACE;evalue=1e-012; PctID=56.34; score=78.6. (120 aa)    
Predicted Functional Partners:
SCM58731.1
XRE family transcriptional regulator {ECO:0000313|EMBL:CCH56554,1}; tr|I2GRM6|I2GRM6_9BACT;evalue=4e-017; PctID=35.94; score=93.6.
  
     0.775
SCM59715.1
Transcriptional regulator {ECO:0000313|EMBL:AAO77467,1}; tr|Q8A582|Q8A582_BACTN,tr|R6US75|R6US75_9BACE; evalue=6e-020; PctID=68.12; score=102.
       0.773
SCM59717.1
Putative protein {ECO:0000313|EMBL:EDM34754,1}; tr|A6EIM8|A6EIM8_9SPHI;evalue=0.0; PctID=54.16; score=743.
  
    0.703
susC81
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-037; PctID=27.96; score=159.
  
     0.568
SCM56245.1
Putative protein {ECO:0000313|EMBL:EIY54596,1}; tr|I9SF91|I9SF91_9BACE;evalue=0.0; PctID=65.12; score=880.
  
    0.511
SCM58792.1
Putative protein {ECO:0000313|EMBL:EGM99633,1}; tr|F7LFW7|F7LFW7_BACOV;evalue=0.0; PctID=75.09; score=850.
  
    0.491
SCM59713.1
Putative protein {ECO:0000313|EMBL:EDV01549,1}; tr|B3JHN2|B3JHN2_9BACE;evalue=2e-123; PctID=53.45; score=449.
       0.485
susC25
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-032; PctID=34.38; score=142.
  
     0.467
SCM57248.1
RagB/SusD domain protein {ECO:0000313|EMBL:ACU04502,1}; tr|C6XYM0|C6XYM0_PEDHD;evalue=0.0; PctID=55.05; score=714.
  
    0.463
SCM58121.1
Putative outer membrane protein {ECO:0000313|EMBL:EDM36092,1}; tr|A6EF21|A6EF21_9SPHI;evalue=0.0; PctID=54.34; score=707.
  
    0.457
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.