STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_0659Predicted dehydrogenase [General function prediction only]; High confidence in function and specificity. (457 aa)    
Predicted Functional Partners:
PSM36_1240
Oxidoreductase; This family of enzymes utilise NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot; High confidence in function and specificity.
 
     0.749
PSM36_3414
Hypothetical protein; High confidence in function and specificity.
 
     0.745
PSM36_0398
Hypothetical protein; High confidence in function and specificity.
  
     0.734
PSM36_3102
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; High confidence in function and specificity.
 
    0.655
PSM36_0180
Hypothetical protein; High confidence in function and specificity.
 
     0.652
PSM36_2922
Hypothetical protein; High confidence in function and specificity.
 
     0.643
PSM36_1674
Hypothetical protein; High confidence in function and specificity.
 
     0.629
PSM36_3065
Hypothetical protein; High confidence in function and specificity.
 
     0.587
PSM36_1546
Hypothetical protein; High confidence in function and specificity.
 
     0.581
PSM36_1241
Sugar phosphate isomerase/epimerase; High confidence in function and specificity.
 
    0.493
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.