STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_0919Hypothetical protein; High confidence in function and specificity. (714 aa)    
Predicted Functional Partners:
PSM36_0921
Polygalacturonase; Random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans; High confidence in function and specificity; Belongs to the glycosyl hydrolase 28 family.
     0.968
PSM36_0935
Glycosyl hydrolases family 43; High confidence in function and specificity; Belongs to the glycosyl hydrolase 43 family.
     0.911
PSM36_3433
Putative rhamnogalacturonyl hydrolase; 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)- alpha-L-rhamnopyranose + H(2)O <=> 5-dehydro-4-deoxy-D-glucuronate + L-rhamnopyranose; High confidence in function and specificity.
     0.883
PSM36_0925
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogala [...]
 
     0.824
PSM36_0923
Exo-poly-alpha-D-galacturonosidase; Hydrolysis of pectic acid from the non-reducing end, releasing digalacturonate; High confidence in function and specificity; Belongs to the glycosyl hydrolase 28 family.
     0.793
PSM36_0920
Hypothetical protein; High confidence in function and specificity.
       0.778
PSM36_0922
Hypothetical protein; High confidence in function and specificity.
 
     0.777
PSM36_0917
Putative Rhamnogalacturonyl hydrolase; 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)- alpha-L-rhamnopyranose + H(2)O <=> 5-dehydro-4-deoxy-D-glucuronate + L-rhamnopyranose; High confidence in function and specificity.
     0.758
PSM36_0927
Putative Rhamnogalacturan_acetylesterase; Hydrolytic cleavage of 2-O-acetyl-or 3-O-acetyl groups of alpha-D-galacturonic acid in rhamnogalacturonan I; High confidence in function and specificity.
 
     0.734
PSM36_0915
Putative polygalacturonase; Random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans; High confidence in function and specificity; Belongs to the glycosyl hydrolase 28 family.
     0.713
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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