Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PSM36_1012 | PSM36_1493 | PSM36_1012 | PSM36_1493 | Putative membrane protein. | Hypothetical protein; High confidence in function and specificity. | 0.433 |
| PSM36_1012 | PSM36_3044 | PSM36_1012 | PSM36_3044 | Putative membrane protein. | Hypothetical protein; Family membership. | 0.447 |
| PSM36_1012 | chuR | PSM36_1012 | PSM36_1011 | Putative membrane protein. | Anaerobic sulfatase-maturating enzyme; Members of this protein family are radical SAM family enzymes, maturases that prepare the oxygen-sensitive radical required in the active site of anaerobic sulfatases. This maturase role has led to many misleading legacy annotations suggesting that this enzyme maturase is instead a sulfatase regulatory protein. All members of the seed alignment are radical SAM enzymes encoded next to or near an anaerobic sulfatase. Note that a single genome may encode more than one sulfatase/maturase pair. [Protein fate, Protein modification and repair]; High conf [...] | 0.559 |
| PSM36_1012 | msrA | PSM36_1012 | PSM36_1915 | Putative membrane protein. | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.479 |
| PSM36_1493 | PSM36_1012 | PSM36_1493 | PSM36_1012 | Hypothetical protein; High confidence in function and specificity. | Putative membrane protein. | 0.433 |
| PSM36_3044 | PSM36_1012 | PSM36_3044 | PSM36_1012 | Hypothetical protein; Family membership. | Putative membrane protein. | 0.447 |
| chuR | PSM36_1012 | PSM36_1011 | PSM36_1012 | Anaerobic sulfatase-maturating enzyme; Members of this protein family are radical SAM family enzymes, maturases that prepare the oxygen-sensitive radical required in the active site of anaerobic sulfatases. This maturase role has led to many misleading legacy annotations suggesting that this enzyme maturase is instead a sulfatase regulatory protein. All members of the seed alignment are radical SAM enzymes encoded next to or near an anaerobic sulfatase. Note that a single genome may encode more than one sulfatase/maturase pair. [Protein fate, Protein modification and repair]; High conf [...] | Putative membrane protein. | 0.559 |
| msrA | PSM36_1012 | PSM36_1915 | PSM36_1012 | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Putative membrane protein. | 0.479 |