STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_1195Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity. (1046 aa)    
Predicted Functional Partners:
PSM36_3059
Putative Alpha-galactosidase; Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids; Hypothetical protein.
 
 
 0.918
PSM36_0634
Putative glucosylceramidase; D-glucosyl-N-acylsphingosine + H2O ightleftharpoons D-glucose + N-acylsphingosine; High confidence in function and specificity; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.903
xylA
Xylose isomerase; D-xylopyranose = D-xylulose; High confidence in function and specificity; Belongs to the xylose isomerase family.
    
 0.808
PSM36_1194
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylg [...]
       0.768
PSM36_2678
Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.749
PSM36_2600
Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.745
PSM36_3309
Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.743
PSM36_0175
Putative beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.742
PSM36_0936
Putative Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.742
PSM36_3107
Beta-galactosidase; Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides; High confidence in function and specificity; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.742
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.