STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_1819Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Conserved hypothetical protein. (167 aa)    
Predicted Functional Partners:
PSM36_1818
Propionyl-CoA carboxylase beta chain, mitochondrial; ATP + propanoyl-CoA + HCO3-= ADP + phosphate + (S)-methylmalonyl-CoA; High confidence in function and specificity.
 
 0.984
PSM36_0958
Pyruvate carboxylase subunit B; High confidence in function and specificity.
 
 
 0.979
PSM36_1434
Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second; High confidence in function and specificity.
 
 
0.971
Pccb
Propionyl-CoA carboxylase beta chain, mitochondrial; ATP + propanoyl-CoA + HCO3-= ADP + phosphate + (S)-methylmalonyl-CoA; High confidence in function and specificity.
 
 0.939
PSM36_0665
Putative biotin-(Acetyl-CoA carboxylase) synthetase; High confidence in function and specificity.
 
  
 0.752
PSM36_2143
Pyruvate carboxylase subunit B.
 
 
0.746
PSM36_1817
Hypothetical protein.
       0.714
PSM36_1820
Acetyl/propionyl-CoA carboxylase, alpha subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
     0.701
PSM36_2182
Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins; High confidence in function and specificity.
  
 
 0.665
PSM36_1337
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
  0.641
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.