STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_1914Putative membrane protein. (108 aa)    
Predicted Functional Partners:
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.713
PSM36_1743
Putative membrane protein.
  
     0.678
PSM36_2007
Hypothetical protein.
  
     0.558
PSM36_2581
Outer membrane receptor proteins; High confidence in function and specificity.
  
     0.526
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.521
PSM36_2832
Phospholipid/glycerol acyltransferase; High confidence in function and specificity.
  
     0.482
PSM36_1867
Hypothetical protein.
  
     0.462
PSM36_1916
Osmotically-inducible protein OsmY.
       0.462
PSM36_1917
Putative peptidoglycan-binding LysM; High confidence in function and specificity.
       0.459
PSM36_0466
Putative secreted protein.
  
     0.458
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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