STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_2108Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]; Family membership. (135 aa)    
Predicted Functional Partners:
PSM36_2109
Hypothetical protein; Family membership.
       0.773
PSM36_1978
Putative nucleic acid-binding protein; High confidence in function and specificity.
  
     0.763
PSM36_1765
Hypothetical protein; Family membership.
 
   
 0.730
PSM36_2110
Hypothetical protein; High confidence in function and specificity.
       0.512
PSM36_0209
Family membership.
 
     0.465
PSM36_1424
Hypothetical protein; Family membership.
  
     0.438
PSM36_1296
Putative nucleic acid-binding protein.
  
     0.437
PSM36_2263
ATP-dependent helicase; High confidence in function and specificity.
 
     0.431
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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