STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_2197alpha-L-rhamnosidase; Hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides; High confidence in function and specificity. (588 aa)    
Predicted Functional Partners:
PSM36_2198
Putative Beta-L-arabinofuranosidase; Ne member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8 has been characterised as an unusual beta-L-arabinofuranosidase enzyme, It rleases l-arabinose from the l-arabinofuranose (Araf)-b1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species; High confidence in function and specificity.
 
     0.826
PSM36_2239
alpha-L-rhamnosidase; Hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides; High confidence in function and specificity.
 
     0.743
PSM36_2228
Alpha-rhamnosidase; This family consists of bacterial rhamnosidase A enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria; High confidence i [...]
 
     0.730
PSM36_2710
Bacterial alpha-L-rhamnosidase; Hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides; High confidence in function and specificity.
 
     0.725
PSM36_2237
Alpha-L-rhamnosidase; This family consists of bacterial rhamnosidase A enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria; High confidence [...]
 
     0.722
PSM36_0404
alpha-L-rhamnosidase; Glycoside hydrolases EC 3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence similarity, has led to the definition of >100 different families; High confidence in function and specificity.
 
     0.709
PSM36_2705
Alpha-L-rhamnosidase; Hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides; High confidence in function and specificity.
 
     0.680
PSM36_2221
Hypothetical proteina; High confidence in function and specificity.
 
     0.604
PSM36_2195
Hypothetical protein; High confidence in function and specificity.
 
     0.593
PSM36_2194
Rhamnose-proton symporter; This family consists of several bacterial L-rhamnose-proton symport protein (RhaT) sequences; High confidence in function and specificity.
 
     0.578
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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