STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSM36_2997Hypothetical protein; High confidence in function and specificity. (709 aa)    
Predicted Functional Partners:
PSM36_3001
Hypothetical protein; High confidence in function and specificity.
 
   
 0.826
PSM36_3000
Tetratricopeptide repeat protein; High confidence in function and specificity.
 
 
   0.809
PSM36_0075
Hypothetical protein; High confidence in function and specificity.
 
  
 0.787
PSM36_1552
The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer. A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit; Conserved hypothetical protein.
 
 
   0.785
PSM36_1874
Outer membrane protein transport protein.
 
   
 0.784
PSM36_1272
Putative membrane protein.
 
   
 0.779
PSM36_1846
Hypothetical protein; High confidence in function and specificity.
 
 
   0.777
PSM36_0676
Hypothetical protein; High confidence in function and specificity.
 
  
 0.774
PSM36_1273
Outer membrane protein assembly factor BamA; High confidence in function and specificity.
 
 
 0.772
PSM36_3352
BamA; Outer membrane protein assembly factor BamA [Cell wall/membrane/envelope biogenesis]; High confidence in function and specificity.
 
 
 0.762
Your Current Organism:
Proteiniphilum saccharofermentans
NCBI taxonomy Id: 1642647
Other names: CECT 8610, DSM 28694, LMG 28299, LMG:28299, P. saccharofermentans, Proteiniphilum saccharofermentans Hahnke et al. 2016, Proteiniphilum sp. M3/6, strain M3/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.