STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZS40279.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)    
Predicted Functional Partners:
KZS42571.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.682
KZS42688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
KZS42659.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.604
KZS38687.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
KZS40841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
KZS42268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.561
KZS41995.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
KZS42034.1
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.531
KZS40743.1
SusC/RagA family TonB-linked outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
Your Current Organism:
Aquimarina aggregata
NCBI taxonomy Id: 1642818
Other names: A. aggregata, Aquimarina aggregata Wang et al. 2016, Aquimarina sp. RZW4-3-2, JCM 30824, MCCC 1K00698, strain RZW4-3-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.