STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZS39563.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (467 aa)    
Predicted Functional Partners:
KZS40042.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.719
KZS40343.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
   
 
  0.706
KZS38910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.705
KZS39564.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.700
KZS38609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.684
KZS41244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
KZS39602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.667
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.656
KZS40983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.649
Your Current Organism:
Aquimarina aggregata
NCBI taxonomy Id: 1642818
Other names: A. aggregata, Aquimarina aggregata Wang et al. 2016, Aquimarina sp. RZW4-3-2, JCM 30824, MCCC 1K00698, strain RZW4-3-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.