STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZS39308.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
KZS39309.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.904
KZS39307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.903
KZS39306.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
KZS39483.1
Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.850
KZS39305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.837
KZS41711.1
NAD(P)H-nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.627
KZS41487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.566
KZS41855.1
Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.560
KZS40938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.475
KZS41668.1
Alginate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.463
Your Current Organism:
Aquimarina aggregata
NCBI taxonomy Id: 1642818
Other names: A. aggregata, Aquimarina aggregata Wang et al. 2016, Aquimarina sp. RZW4-3-2, JCM 30824, MCCC 1K00698, strain RZW4-3-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.