Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3G552_PHYRM | H3G777_PHYRM | H3G552 | H3G777 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
H3G552_PHYRM | H3G7Y5_PHYRM | H3G552 | H3G7Y5 | Uncharacterized protein. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.500 |
H3G552_PHYRM | H3G8T1_PHYRM | H3G552 | H3G8T1 | Uncharacterized protein. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.532 |
H3G552_PHYRM | H3G9H1_PHYRM | H3G552 | H3G9H1 | Uncharacterized protein. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.554 |
H3G552_PHYRM | H3G9V7_PHYRM | H3G552 | H3G9V7 | Uncharacterized protein. | Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.699 |
H3G552_PHYRM | H3GAM8_PHYRM | H3G552 | H3GAM8 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
H3G552_PHYRM | H3GB83_PHYRM | H3G552 | H3GB83 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
H3G552_PHYRM | H3GDW5_PHYRM | H3G552 | H3GDW5 | Uncharacterized protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | 0.485 |
H3G552_PHYRM | H3H8F1_PHYRM | H3G552 | H3H8F1 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
H3G552_PHYRM | H3H908_PHYRM | H3G552 | H3H908 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
H3G777_PHYRM | H3G552_PHYRM | H3G777 | H3G552 | Uncharacterized protein. | Uncharacterized protein. | 0.612 |
H3G777_PHYRM | H3G9V7_PHYRM | H3G777 | H3G9V7 | Uncharacterized protein. | Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.929 |
H3G777_PHYRM | H3GDW5_PHYRM | H3G777 | H3GDW5 | Uncharacterized protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family. | 0.551 |
H3G777_PHYRM | H3H8F1_PHYRM | H3G777 | H3H8F1 | Uncharacterized protein. | Uncharacterized protein. | 0.929 |
H3G7Y5_PHYRM | H3G552_PHYRM | H3G7Y5 | H3G552 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | Uncharacterized protein. | 0.500 |
H3G7Y5_PHYRM | H3G9H1_PHYRM | H3G7Y5 | H3G9H1 | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.419 |
H3G8T1_PHYRM | H3G552_PHYRM | H3G8T1 | H3G552 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Uncharacterized protein. | 0.532 |
H3G8T1_PHYRM | H3GAM8_PHYRM | H3G8T1 | H3GAM8 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Uncharacterized protein. | 0.443 |
H3G9H1_PHYRM | H3G552_PHYRM | H3G9H1 | H3G552 | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | Uncharacterized protein. | 0.554 |
H3G9H1_PHYRM | H3G7Y5_PHYRM | H3G9H1 | H3G7Y5 | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.419 |
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