STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G5G9_PHYRMProhibitin. (277 aa)    
Predicted Functional Partners:
H3G994_PHYRM
Prohibitin.
  
0.999
H3G847_PHYRM
Uncharacterized protein; Belongs to the peptidase M16 family.
  
 0.955
H3G8R2_PHYRM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.858
H3G9B5_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.850
H3GLF9_PHYRM
AAA domain-containing protein.
   
 0.850
H3H0I1_PHYRM
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
 0.850
H3GXS1_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.821
H3GCN7_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.751
H3GCN8_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.751
H3GCP5_PHYRM
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.751
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.