STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G600_PHYRMUncharacterized protein. (418 aa)    
Predicted Functional Partners:
H3GCM9_PHYRM
Importin N-terminal domain-containing protein.
   
 0.901
H3GVH6_PHYRM
Importin N-terminal domain-containing protein.
   
 0.891
H3GMP6_PHYRM
Uncharacterized protein.
    
 
 0.770
H3G6M7_PHYRM
Nuclear cap-binding protein subunit 2.
    
 
 0.753
H3G5K6_PHYRM
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.738
H3G7J3_PHYRM
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.738
H3HA42_PHYRM
HRDC domain-containing protein.
    
   0.738
H3GMK0_PHYRM
Uncharacterized protein.
    
 
 0.729
H3GNF4_PHYRM
RanBD1 domain-containing protein.
   
 
 0.714
H3GXT3_PHYRM
RanBD1 domain-containing protein.
   
 
 0.714
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (30%) [HD]