STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G603_PHYRMCation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1275 aa)    
Predicted Functional Partners:
H3GXC2_PHYRM
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
     
 0.604
H3GA88_PHYRM
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
     
 0.588
H3GEM6_PHYRM
Uncharacterized protein.
    
 0.560
H3H2A7_PHYRM
Uncharacterized protein.
    
 0.560
H3H5Y2_PHYRM
PPM-type phosphatase domain-containing protein.
    
 0.560
H3GRL3_PHYRM
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
    
 0.553
H3GPI8_PHYRM
Uncharacterized protein.
     
 0.516
H3GYT2_PHYRM
Uncharacterized protein.
     
 0.516
H3G8D1_PHYRM
Uncharacterized protein.
    
 0.511
H3G8L5_PHYRM
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.511
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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