STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G7G0_PHYRMSuperoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (197 aa)    
Predicted Functional Partners:
H3G9J7_PHYRM
Sod_Cu domain-containing protein.
   
 0.984
H3G5H3_PHYRM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.944
H3GGY8_PHYRM
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.935
H3G8X3_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.930
H3G899_PHYRM
Uncharacterized protein.
   
 
 0.926
H3GRM0_PHYRM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.926
H3G6K5_PHYRM
Uncharacterized protein.
   
   0.925
H3GIR9_PHYRM
Nudix hydrolase domain-containing protein.
   
 
 0.922
H3G536_PHYRM
Uncharacterized protein.
   
 
 0.920
H3GIH3_PHYRM
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.910
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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