STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G7G2_PHYRMNADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (258 aa)    
Predicted Functional Partners:
H3GAQ0_PHYRM
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.937
H3H2H6_PHYRM
DHO_dh domain-containing protein.
  
 0.937
H3H0M0_PHYRM
Uncharacterized protein.
  
0.910
H3G5G5_PHYRM
OMPdecase domain-containing protein.
  
 
 0.898
H3GA48_PHYRM
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.884
H3G8V1_PHYRM
Uncharacterized protein.
  
 
 0.869
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
0.845
H3G6H0_PHYRM
Uncharacterized protein.
  
 0.812
H3G723_PHYRM
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 0.812
H3GA51_PHYRM
Uncharacterized protein.
  
 0.812
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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