STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8A6_PHYRMUncharacterized protein. (224 aa)    
Predicted Functional Partners:
H3HAP6_PHYRM
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
 0.998
H3G4X5_PHYRM
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
 0.997
H3G4Z4_PHYRM
SGNH_hydro domain-containing protein.
  
 0.965
H3GML0_PHYRM
SGNH_hydro domain-containing protein.
  
 0.965
H3GML1_PHYRM
SGNH_hydro domain-containing protein.
  
 0.965
H3GZR3_PHYRM
SGNH_hydro domain-containing protein.
  
 0.965
H3H1L5_PHYRM
Uncharacterized protein.
  
 0.965
H3HE43_PHYRM
Uncharacterized protein.
  
 0.965
H3G7U0_PHYRM
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 0.942
H3GSP4_PHYRM
Phos_pyr_kin domain-containing protein.
    
 0.939
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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