STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8G3_PHYRMTauD domain-containing protein. (376 aa)    
Predicted Functional Partners:
H3G6N5_PHYRM
Uncharacterized protein.
    
 0.997
H3H0R2_PHYRM
dUTPase domain-containing protein.
   
 0.862
H3GG34_PHYRM
Uncharacterized protein.
    
 0.794
H3GZE2_PHYRM
ERCC4 domain-containing protein.
   
 0.758
H3GLG9_PHYRM
Uncharacterized protein.
    
 0.747
H3GL41_PHYRM
Uncharacterized protein.
    
 0.746
H3GXE1_PHYRM
Uncharacterized protein.
    
 0.746
H3GH19_PHYRM
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.745
H3GW51_PHYRM
Uncharacterized protein.
    
 0.724
H3GFY1_PHYRM
Uridine kinase; Belongs to the uridine kinase family.
    
 0.709
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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