STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8I3_PHYRMAldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (496 aa)    
Predicted Functional Partners:
H3GAK3_PHYRM
Acetyl-coenzyme A synthetase.
   
 0.898
H3G873_PHYRM
Aldedh domain-containing protein.
    
0.896
H3H1K9_PHYRM
Acetyl-coenzyme A synthetase.
   
 0.896
H3GUR3_PHYRM
Uncharacterized protein.
    
 0.885
H3G7S4_PHYRM
Uncharacterized protein.
   
  0.876
H3G8K5_PHYRM
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.874
H3GAK4_PHYRM
Acetyl-coenzyme A synthetase.
   
 0.868
H3GB63_PHYRM
Acetyl-coenzyme A synthetase.
   
 0.868
H3GAM8_PHYRM
Uncharacterized protein.
     
 0.866
H3GA31_PHYRM
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.865
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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