STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8P5_PHYRMThioredoxin domain-containing protein. (225 aa)    
Predicted Functional Partners:
H3GIS8_PHYRM
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.926
H3GAK0_PHYRM
Uncharacterized protein.
    
 0.902
H3G551_PHYRM
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.898
H3GP91_PHYRM
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.898
H3GA09_PHYRM
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.887
H3GA84_PHYRM
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.887
H3H115_PHYRM
Glutathione synthetase.
   
 
 0.845
H3H114_PHYRM
Uncharacterized protein.
   
 
 0.842
H3HAZ6_PHYRM
Thioredoxin domain-containing protein.
   
 0.733
H3GBW9_PHYRM
Uncharacterized protein.
    
  0.712
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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