STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G8S0_PHYRMCYTOSOL_AP domain-containing protein. (288 aa)    
Predicted Functional Partners:
H3GHQ2_PHYRM
Peptidase_M17_N domain-containing protein.
 
      0.899
H3GAK0_PHYRM
Uncharacterized protein.
     
 0.885
H3G9S1_PHYRM
Aspartate aminotransferase.
    
 0.884
H3G8X9_PHYRM
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.866
H3G8J7_PHYRM
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.862
H3G8J8_PHYRM
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.862
H3G6B6_PHYRM
PALP domain-containing protein.
    
 0.861
H3G967_PHYRM
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.861
H3GN18_PHYRM
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.861
H3HED1_PHYRM
Aminotran_1_2 domain-containing protein.
   
  0.852
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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