STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G9R8_PHYRMFAD-binding PCMH-type domain-containing protein. (499 aa)    
Predicted Functional Partners:
H3G8X1_PHYRM
Malate synthase; Belongs to the malate synthase family.
  
 
 0.814
H3GAJ1_PHYRM
FMN hydroxy acid dehydrogenase domain-containing protein.
 
 0.750
H3G504_PHYRM
FMN hydroxy acid dehydrogenase domain-containing protein.
  
 0.748
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.731
H3H0M0_PHYRM
Uncharacterized protein.
    
 0.731
H3G7S9_PHYRM
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.691
H3GAL6_PHYRM
ETF domain-containing protein.
  
 
 0.676
H3G8P0_PHYRM
Uncharacterized protein.
   
 0.669
H3G9J1_PHYRM
Acetolactate synthase.
   
 0.666
H3HBC2_PHYRM
ETF domain-containing protein.
  
 
 0.663
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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