STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G9T6_PHYRMUncharacterized protein. (234 aa)    
Predicted Functional Partners:
H3GR00_PHYRM
Uncharacterized protein.
  
   
 0.530
H3GJS8_PHYRM
Sushi domain-containing protein.
    
 0.491
H3GP76_PHYRM
Uncharacterized protein.
     
 0.485
H3HD50_PHYRM
Uncharacterized protein.
 
      0.443
H3G5G1_PHYRM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.412
H3GUA9_PHYRM
Uncharacterized protein.
 
  
   0.408
H3G785_PHYRM
Uncharacterized protein.
    
  0.400
H3GBG0_PHYRM
Uncharacterized protein.
    
  0.400
H3GBM1_PHYRM
Uncharacterized protein.
    
  0.400
H3GI80_PHYRM
Uncharacterized protein.
    
  0.400
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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