STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G9U5_PHYRMUncharacterized protein; Belongs to the pirin family. (294 aa)    
Predicted Functional Partners:
H3GS76_PHYRM
Uncharacterized protein.
    
 0.613
H3GCJ1_PHYRM
Alpha-amylase.
    
 0.610
H3GMB2_PHYRM
Fe2OG dioxygenase domain-containing protein.
    
 0.610
H3GU15_PHYRM
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.610
H3H8M5_PHYRM
Alpha-amylase.
    
 0.610
H3GHV1_PHYRM
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.586
H3GJS8_PHYRM
Sushi domain-containing protein.
    
 0.549
H3G9T7_PHYRM
Uncharacterized protein.
    
 
 0.542
H3GQM0_PHYRM
Protein kinase domain-containing protein.
    
  0.534
H3GCT4_PHYRM
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
    
  0.459
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.