STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3G9Y0_PHYRMTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (452 aa)    
Predicted Functional Partners:
H3GAD7_PHYRM
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
0.963
H3HAQ6_PHYRM
Tubulin domain-containing protein; Belongs to the tubulin family.
  
0.911
H3G7Q3_PHYRM
Tubulin_C domain-containing protein; Belongs to the tubulin family.
   
0.900
H3H2W1_PHYRM
Uncharacterized protein.
    
 0.853
H3GM82_PHYRM
Uncharacterized protein.
 
  
 0.849
H3G9D1_PHYRM
Uncharacterized protein.
   
 0.795
H3GBC8_PHYRM
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.773
H3GU85_PHYRM
Uncharacterized protein.
    
 0.754
H3GMK0_PHYRM
Uncharacterized protein.
    
 
 0.747
H3G9B8_PHYRM
Uncharacterized protein.
  
 
 0.699
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.