STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GA15_PHYRMRadical_SAM domain-containing protein. (379 aa)    
Predicted Functional Partners:
H3G9X1_PHYRM
Uncharacterized protein; Belongs to the ferrochelatase family.
    
 0.795
H3G6T3_PHYRM
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
    
 0.748
H3G5Q1_PHYRM
Elp3 domain-containing protein.
    
 0.738
H3G7B1_PHYRM
MoaC domain-containing protein.
    
 0.738
H3G4X8_PHYRM
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.735
H3GC34_PHYRM
Uncharacterized protein.
     
 0.683
H3GGB0_PHYRM
Nudix hydrolase domain-containing protein.
     
 0.675
H3G9S6_PHYRM
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
  0.641
H3GT07_PHYRM
HEM4 domain-containing protein.
    
 0.600
H3H381_PHYRM
FYVE-type domain-containing protein.
     
 0.591
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.