STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GA20_PHYRMUncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (361 aa)    
Predicted Functional Partners:
H3GRQ9_PHYRM
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
 
  
 
 0.614
H3G822_PHYRM
Cation_ATPase_C domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
 
  
 
 0.612
H3GQ90_PHYRM
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
 
  
 
 0.611
H3G5Z1_PHYRM
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
 
  
 
 0.610
H3GDP3_PHYRM
DUF2040 domain-containing protein.
   
    0.545
H3G6G9_PHYRM
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
    0.520
H3GBR0_PHYRM
Uncharacterized protein.
    
 
 0.451
H3GE35_PHYRM
EF-hand domain-containing protein.
    
 
 0.451
H3GIQ6_PHYRM
Uncharacterized protein.
    
 
 0.451
H3H1P6_PHYRM
Uncharacterized protein.
    
 
 0.451
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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