Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FEN1 | H3G5W3_PHYRM | H3GAS1 | H3G5W3 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | 0.980 |
| FEN1 | H3G6F5_PHYRM | H3GAS1 | H3G6F5 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.697 |
| FEN1 | H3GA74_PHYRM | H3GAS1 | H3GA74 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | AAA_23 domain-containing protein. | 0.908 |
| FEN1 | H3GFX6_PHYRM | H3GAS1 | H3GFX6 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.665 |
| FEN1 | H3GM95_PHYRM | H3GAS1 | H3GM95 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.732 |
| FEN1 | H3GMG2_PHYRM | H3GAS1 | H3GMG2 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.697 |
| FEN1 | H3GXW6_PHYRM | H3GAS1 | H3GXW6 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.908 |
| FEN1 | H3HC67_PHYRM | H3GAS1 | H3HC67 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.732 |
| FEN1 | H3HDB4_PHYRM | H3GAS1 | H3HDB4 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | FHA domain-containing protein. | 0.818 |
| FEN1 | H3HDP1_PHYRM | H3GAS1 | H3HDP1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.899 |
| H3G5W3_PHYRM | FEN1 | H3G5W3 | H3GAS1 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.980 |
| H3G5W3_PHYRM | H3G6F5_PHYRM | H3G5W3 | H3G6F5 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.971 |
| H3G5W3_PHYRM | H3GA74_PHYRM | H3G5W3 | H3GA74 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | AAA_23 domain-containing protein. | 0.995 |
| H3G5W3_PHYRM | H3GFX6_PHYRM | H3G5W3 | H3GFX6 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein. | 0.981 |
| H3G5W3_PHYRM | H3GM95_PHYRM | H3G5W3 | H3GM95 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein. | 0.925 |
| H3G5W3_PHYRM | H3GMG2_PHYRM | H3G5W3 | H3GMG2 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein. | 0.971 |
| H3G5W3_PHYRM | H3GXW6_PHYRM | H3G5W3 | H3GXW6 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein. | 0.997 |
| H3G5W3_PHYRM | H3HC67_PHYRM | H3G5W3 | H3HC67 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.925 |
| H3G5W3_PHYRM | H3HDB4_PHYRM | H3G5W3 | H3HDB4 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | FHA domain-containing protein. | 0.999 |
| H3G5W3_PHYRM | H3HDP1_PHYRM | H3G5W3 | H3HDP1 | Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. | Uncharacterized protein. | 0.832 |
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