STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GA88_PHYRMUMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (198 aa)    
Predicted Functional Partners:
H3G5G5_PHYRM
OMPdecase domain-containing protein.
   
 0.938
H3G8V0_PHYRM
Nucleoside diphosphate kinase.
  
 0.927
H3HCR6_PHYRM
Nucleoside diphosphate kinase.
  
 0.927
H3GQS7_PHYRM
Uncharacterized protein.
    
 0.920
H3G6M2_PHYRM
Uncharacterized protein.
    
 0.918
H3HBE1_PHYRM
Uncharacterized protein.
     
 0.909
H3G722_PHYRM
CMP/dCMP-type deaminase domain-containing protein.
   
 0.904
H3GA16_PHYRM
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.903
H3GXF3_PHYRM
Uncharacterized protein.
     
 0.900
H3H550_PHYRM
Uncharacterized protein.
     
 0.900
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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