STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GAI3_PHYRMPfkB domain-containing protein. (345 aa)    
Predicted Functional Partners:
H3GBB8_PHYRM
Pribosyltran domain-containing protein.
  
 0.972
H3G8H8_PHYRM
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.954
H3GVM4_PHYRM
A_deaminase domain-containing protein.
    
 0.946
H3G9X0_PHYRM
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
  
 0.937
H3GGY7_PHYRM
Uncharacterized protein; Belongs to the adenylate kinase family.
  
 0.937
H3G6G8_PHYRM
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
  
 0.935
H3GIP3_PHYRM
Uncharacterized protein; Belongs to the adenylate kinase family.
  
 0.935
H3GIP9_PHYRM
Uncharacterized protein.
  
 0.935
H3G744_PHYRM
A_deaminase domain-containing protein.
    
 0.909
H3H6L0_PHYRM
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
    
 0.909
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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