STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GAK8_PHYRMUncharacterized protein. (649 aa)    
Predicted Functional Partners:
H3GED5_PHYRM
Uncharacterized protein.
 
 
 0.938
H3G865_PHYRM
Amidohydro-rel domain-containing protein.
  
  
  0.928
H3GMK0_PHYRM
Uncharacterized protein.
    
 0.769
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.742
H3H0M0_PHYRM
Uncharacterized protein.
    
 0.742
H3GEM6_PHYRM
Uncharacterized protein.
    
 0.627
H3H2A7_PHYRM
Uncharacterized protein.
    
 0.627
H3H5Y2_PHYRM
PPM-type phosphatase domain-containing protein.
    
 0.627
H3GAS8_PHYRM
Ribosomal_S10 domain-containing protein.
    
  0.613
H3G4Y3_PHYRM
Uncharacterized protein.
    
  0.611
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.