STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GAZ7_PHYRMGp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (505 aa)    
Predicted Functional Partners:
H3G8F9_PHYRM
Triosephosphate isomerase.
 
 0.925
H3G9A8_PHYRM
Triosephosphate isomerase.
 
 0.925
H3G9S8_PHYRM
Uncharacterized protein.
  
 0.910
H3G9R1_PHYRM
Phosphoglycerate kinase.
 
 0.859
H3GAQ8_PHYRM
Phosphoglycerate kinase.
 
 0.859
H3GBR3_PHYRM
Uncharacterized protein.
  
 0.859
H3GCU7_PHYRM
Phosphoglycerate kinase.
  
 0.859
H3GWF8_PHYRM
Uncharacterized protein.
  
 0.859
H3G8D0_PHYRM
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.848
H3G5Q3_PHYRM
Enolase_C domain-containing protein.
  
 0.798
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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