STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GBF2_PHYRMHelicase C-terminal domain-containing protein. (883 aa)    
Predicted Functional Partners:
H3G8Y9_PHYRM
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.911
H3GIA7_PHYRM
PRA-CH domain-containing protein.
  
 
 0.911
H3HBM0_PHYRM
Uncharacterized protein.
  
 
 0.911
H3GGT2_PHYRM
Uncharacterized protein; Belongs to the HisA/HisF family.
  
 
 0.910
H3G8H1_PHYRM
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.906
H3G5B2_PHYRM
Aminotran_1_2 domain-containing protein.
  
 
 0.842
H3GI85_PHYRM
Aminotran_1_2 domain-containing protein.
  
 
 0.842
H3GMS2_PHYRM
Uncharacterized protein.
  
 
 0.839
H3GBC6_PHYRM
Uncharacterized protein; Belongs to the TrpA family.
  
  
 0.755
H3G8V9_PHYRM
PALP domain-containing protein.
  
  
 0.752
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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