STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GBQ0_PHYRMCytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (409 aa)    
Predicted Functional Partners:
H3GG45_PHYRM
Uncharacterized protein.
   
 
 0.954
H3G9X1_PHYRM
Uncharacterized protein; Belongs to the ferrochelatase family.
     
 0.914
H3HB61_PHYRM
Uncharacterized protein.
     
 0.831
H3G7D8_PHYRM
Cytochrome c domain-containing protein.
   
 
 0.655
H3H3M7_PHYRM
Uncharacterized protein.
   
  
 0.643
H3GFL7_PHYRM
Epimerase domain-containing protein.
   
 
 0.601
H3G581_PHYRM
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.535
H3GII1_PHYRM
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
  
 0.508
H3GIG7_PHYRM
Uncharacterized protein.
   
    0.476
H3GMX3_PHYRM
Uncharacterized protein; Belongs to the complex I LYR family.
   
  
 0.467
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.