STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GCF3_PHYRMLigB domain-containing protein. (430 aa)    
Predicted Functional Partners:
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.835
H3H0M0_PHYRM
Uncharacterized protein.
    
  0.835
H3G8X1_PHYRM
Malate synthase; Belongs to the malate synthase family.
   
 0.690
H3GWN7_PHYRM
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.493
H3G781_PHYRM
Semialdhyde_dh domain-containing protein.
    
  0.488
H3GE58_PHYRM
Thymidine kinase.
    
 0.469
H3GCZ2_PHYRM
Homoserine dehydrogenase.
    
  0.428
H3H0W4_PHYRM
ACT domain-containing protein.
    
  0.428
H3GDW1_PHYRM
Aminotran_5 domain-containing protein.
   
 
  0.423
H3GLX3_PHYRM
Aminotran_5 domain-containing protein.
   
 
  0.423
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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