STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GCF9_PHYRMProtein kinase domain-containing protein. (695 aa)    
Predicted Functional Partners:
H3GMK0_PHYRM
Uncharacterized protein.
    
 0.869
H3GXH6_PHYRM
Uncharacterized protein.
    
  0.731
H3GYA8_PHYRM
Protein kinase domain-containing protein.
    
0.697
H3HB71_PHYRM
Uncharacterized protein.
    
 0.697
H3H4U3_PHYRM
Uncharacterized protein.
   
  0.665
H3GTT4_PHYRM
Uncharacterized protein; Belongs to the syntaxin family.
    
  0.635
H3G8D3_PHYRM
Uncharacterized protein.
    
 0.604
H3G9K1_PHYRM
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.604
H3GBM8_PHYRM
Uncharacterized protein.
    
 0.604
H3GCE1_PHYRM
Uncharacterized protein.
    
 0.604
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (12%) [HD]