STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GCS4_PHYRMProtein kinase domain-containing protein. (1273 aa)    
Predicted Functional Partners:
H3GA62_PHYRM
S1 motif domain-containing protein.
   
 0.981
H3HBM0_PHYRM
Uncharacterized protein.
  
 0.889
H3GIT1_PHYRM
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.810
H3GIA7_PHYRM
PRA-CH domain-containing protein.
    
 0.770
H3G8J5_PHYRM
Tr-type G domain-containing protein.
   
 0.754
H3GH83_PHYRM
Uncharacterized protein.
   
 
 0.732
H3H0X3_PHYRM
Uncharacterized protein.
   
 
 0.732
H3GGU4_PHYRM
eIF2B_5 domain-containing protein.
   
 0.696
H3G7B8_PHYRM
Tr-type G domain-containing protein.
   
 0.673
H3G5Z2_PHYRM
WD_REPEATS_REGION domain-containing protein.
    
 0.671
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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