STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GCZ6_PHYRMAmmonium transporter. (514 aa)    
Predicted Functional Partners:
H3G951_PHYRM
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.785
H3GZ56_PHYRM
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
     
 0.532
H3GAB1_PHYRM
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.523
H3GQ46_PHYRM
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.523
H3H1C0_PHYRM
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 
  0.506
H3G8L8_PHYRM
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.490
H3G8M4_PHYRM
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.490
H3GAH1_PHYRM
Glutamine synthetase.
  
  
 0.454
H3GAH2_PHYRM
Glutamine synthetase.
  
  
 0.454
H3GIG5_PHYRM
Inositol-1-monophosphatase.
    
  0.454
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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