STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GEJ0_PHYRMUncharacterized protein. (274 aa)    
Predicted Functional Partners:
H3GLV5_PHYRM
Uncharacterized protein.
    
 0.999
H3GVF5_PHYRM
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.995
H3HAR3_PHYRM
Uncharacterized protein.
    
 0.994
H3H0Q5_PHYRM
Uncharacterized protein.
    
 0.980
H3HBJ7_PHYRM
Uncharacterized protein.
    
 0.979
H3GNV8_PHYRM
TPR_REGION domain-containing protein.
    
 0.962
H3GSD7_PHYRM
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.944
H3G8V4_PHYRM
t-SNARE coiled-coil homology domain-containing protein.
   
 0.912
H3HE62_PHYRM
t-SNARE coiled-coil homology domain-containing protein.
   
 0.912
H3GZ14_PHYRM
Uncharacterized protein.
    
  0.873
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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