STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GFX9_PHYRMPPM-type phosphatase domain-containing protein. (431 aa)    
Predicted Functional Partners:
H3GFF8_PHYRM
RING-type domain-containing protein.
    
 0.610
H3GL81_PHYRM
Uncharacterized protein.
    
 0.609
H3GPA3_PHYRM
Uncharacterized protein.
    
 0.609
H3G856_PHYRM
Transket_pyr domain-containing protein.
    
 0.581
H3GPN9_PHYRM
Uncharacterized protein.
  
   0.576
H3G9H1_PHYRM
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
  0.558
H3GGI9_PHYRM
TPR_REGION domain-containing protein.
    
 0.531
H3G928_PHYRM
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.524
H3HBB3_PHYRM
PHD domain-containing protein.
    
 0.520
H3G797_PHYRM
GTP_cyclohydroI domain-containing protein.
    
  0.494
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.