STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GGY8_PHYRMRibosomal_L18e/L15P domain-containing protein. (253 aa)    
Predicted Functional Partners:
H3GV22_PHYRM
Uncharacterized protein.
   
 0.999
H3G899_PHYRM
Uncharacterized protein.
  
 0.997
H3G8X3_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.997
H3GBT9_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
H3G5H3_PHYRM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.996
H3G6J0_PHYRM
Uncharacterized protein.
   
 
 0.996
H3G8J2_PHYRM
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.996
H3G9B7_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 0.996
H3GAN3_PHYRM
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.996
H3GHB9_PHYRM
Uncharacterized protein.
  
 0.996
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.