STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GHC5_PHYRMUncharacterized protein. (651 aa)    
Predicted Functional Partners:
H3H0R2_PHYRM
dUTPase domain-containing protein.
    
 0.851
H3H3K4_PHYRM
DUF4203 domain-containing protein.
    
 0.719
H3G880_PHYRM
Histone H3; Belongs to the histone H3 family.
    
 0.577
H3G9N3_PHYRM
Histone H3; Belongs to the histone H3 family.
    
 0.577
H3GUB6_PHYRM
DHR10 domain-containing protein.
    
 
 0.577
H3HDX5_PHYRM
Uncharacterized protein.
    
 0.577
H3G7Q3_PHYRM
Tubulin_C domain-containing protein; Belongs to the tubulin family.
    
 0.569
H3GAD7_PHYRM
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.569
H3HAQ6_PHYRM
Tubulin domain-containing protein; Belongs to the tubulin family.
    
 0.569
H3G593_PHYRM
Uncharacterized protein.
    
 0.557
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.