STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GHE7_PHYRMPhosphodiesterase. (1137 aa)    
Predicted Functional Partners:
H3G744_PHYRM
A_deaminase domain-containing protein.
     
 0.802
H3H6L0_PHYRM
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
     
 0.802
H3GS61_PHYRM
Phosphodiesterase.
     
0.729
H3GXH5_PHYRM
Uncharacterized protein.
     
 0.710
H3G9Z9_PHYRM
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
     
 0.667
H3GBS7_PHYRM
Phosphodiesterase.
    
0.578
H3GBT1_PHYRM
Phosphodiesterase.
    
0.578
H3GFD2_PHYRM
Uncharacterized protein.
    
0.578
H3GHU2_PHYRM
PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family.
    
0.578
H3GMG8_PHYRM
Phosphodiesterase.
    
0.578
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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