STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GHR6_PHYRMUncharacterized protein. (581 aa)    
Predicted Functional Partners:
H3GMW6_PHYRM
Uncharacterized protein; Belongs to the peptidase C1 family.
    
   0.915
H3G951_PHYRM
Citrate synthase; Belongs to the citrate synthase family.
   
 0.809
H3G581_PHYRM
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.795
H3GQP5_PHYRM
ATP-synt_ab domain-containing protein.
   
 0.773
H3G847_PHYRM
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 
 0.763
H3GAY8_PHYRM
OBG-type G domain-containing protein.
    
   0.733
H3GTT4_PHYRM
Uncharacterized protein; Belongs to the syntaxin family.
    
   0.729
H3G9K5_PHYRM
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.721
H3GAE2_PHYRM
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.704
H3GUC0_PHYRM
Uncharacterized protein.
    
   0.704
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.