STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GIE5_PHYRMGTP_cyclohydro2 domain-containing protein. (281 aa)    
Predicted Functional Partners:
H3GC59_PHYRM
Uncharacterized protein.
 0.968
H3H5S3_PHYRM
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.961
H3G8T6_PHYRM
Uncharacterized protein.
 
     0.949
H3G8T7_PHYRM
Uncharacterized protein.
 
     0.949
H3GEE0_PHYRM
Coronin; Belongs to the WD repeat coronin family.
  
 0.794
H3GJY6_PHYRM
Coronin; Belongs to the WD repeat coronin family.
  
 0.794
H3GAA3_PHYRM
Flavokinase domain-containing protein.
   
 0.725
H3H7V5_PHYRM
CMP/dCMP-type deaminase domain-containing protein.
 
  
 0.703
H3GAM8_PHYRM
Uncharacterized protein.
    
 0.682
H3G9T7_PHYRM
Uncharacterized protein.
    
 0.648
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.