STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GJ36_PHYRMBRCT domain-containing protein. (179 aa)    
Predicted Functional Partners:
H3H058_PHYRM
UmuC domain-containing protein.
   
 0.975
H3G9U4_PHYRM
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.966
H3GH86_PHYRM
UmuC domain-containing protein.
   
 0.964
H3GR03_PHYRM
Uncharacterized protein.
   
 0.923
H3HCN7_PHYRM
DNA_pol_B domain-containing protein.
   
 0.923
H3G8T9_PHYRM
Ubiquitin-like domain-containing protein.
    
  0.891
H3G789_PHYRM
Ubiquitin-like domain-containing protein.
    
  0.845
H3G8V5_PHYRM
Ubiquitin-like domain-containing protein.
    
  0.845
H3GAM4_PHYRM
DNA polymerase.
   
 0.805
H3G7C4_PHYRM
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.788
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.