STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GK27_PHYRMElongation of fatty acids protein. (275 aa)    
Predicted Functional Partners:
H3G8H6_PHYRM
S5A_REDUCTASE domain-containing protein.
    
 0.937
H3GTD3_PHYRM
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.925
H3GV43_PHYRM
Uncharacterized protein.
    
 0.920
H3GWR4_PHYRM
Elongation of fatty acids protein.
  
  
 
0.901
H3GJY2_PHYRM
Elongation of fatty acids protein.
  
  
0.872
H3GWR5_PHYRM
Elongation of fatty acids protein.
  
  
 
0.855
H3G8U0_PHYRM
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.571
H3GA58_PHYRM
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.571
H3HCG3_PHYRM
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.571
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.549
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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